Developmental, genetic and environmental variations of global DNA methylation in the first leaves emerging from the shoot apical meristem in poplar trees.
Identifieur interne : 000A30 ( Main/Exploration ); précédent : 000A29; suivant : 000A31Developmental, genetic and environmental variations of global DNA methylation in the first leaves emerging from the shoot apical meristem in poplar trees.
Auteurs : Le Gac A-L [France, Allemagne] ; Lafon-Placette C [France, République tchèque] ; Delaunay A [France] ; Maury S [France]Source :
- Plant signaling & behavior [ 1559-2324 ] ; 2019.
Descripteurs français
- KwdFr :
- MESH :
- croissance et développement : Arbres, Méristème, Populus.
- génétique : Arbres, Feuilles de plante, Méristème, Méthylation de l'ADN, Populus.
- Environnement, Génotype.
English descriptors
- KwdEn :
- MESH :
- genetics : DNA Methylation, Meristem, Plant Leaves, Populus, Trees.
- growth & development : Meristem, Populus, Trees.
- Environment, Genotype.
Abstract
In the context of climate changes, clarifying the causes underlying tree phenotypic plasticity and adaptation is crucial. Studies suggest a role of epigenetic mechanisms in response to external stimuli, raising the question whether such processes can promote acclimation of trees exposed to adverse climate conditions. Recently, we revealed an environmental epigenetic footprint in the shoot apical meristem (SAM) which could partially be transmitted mitotically, for several months, up until the winter-dormant bud in field conditions. Here, we extended our previous analysis to the leaves of the same P. deltoides×P. nigra clones. We aimed at estimating the range of developmentally, genetically, and environmentally induced variations on DNA methylation. We showed that only the first leaves emerging from the SAM displayed variations of DNA methylation under changing water conditions. We also found that these variations are genotype- and pedoclimatic site-dependent. Altogether, our data raised questions and perspectives on the direct acquisition, the maintenance of environmentally induced DNA methylation changes, and their mitotic transmission from the SAM to the first emerging leaves.
DOI: 10.1080/15592324.2019.1596717
PubMed: 30915897
PubMed Central: PMC6546136
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Biology III , University of Freiburg , Freiburg , Germany.</nlm:affiliation><country xml:lang="fr">Allemagne</country><wicri:regionArea>b Institute for Biology III , University of Freiburg , Freiburg </wicri:regionArea><wicri:noRegion>Freiburg </wicri:noRegion><wicri:noRegion>Freiburg </wicri:noRegion><wicri:noRegion>Freiburg </wicri:noRegion></affiliation></author><author><name sortKey="C, Lafon Placette" sort="C, Lafon Placette" uniqKey="C L" first="Lafon-Placette" last="C">Lafon-Placette C</name><affiliation wicri:level="1"><nlm:affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans </wicri:regionArea><wicri:noRegion>Orléans </wicri:noRegion><wicri:noRegion>Orléans </wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>c Department of Botany , Charles University , Prague , Czech Republic.</nlm:affiliation><country xml:lang="fr">République tchèque</country><wicri:regionArea>c Department of Botany , Charles University , Prague </wicri:regionArea><wicri:noRegion>Prague </wicri:noRegion></affiliation></author><author><name sortKey="A, Delaunay" sort="A, Delaunay" uniqKey="A D" first="Delaunay" last="A">Delaunay A</name><affiliation wicri:level="1"><nlm:affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans </wicri:regionArea><wicri:noRegion>Orléans </wicri:noRegion><wicri:noRegion>Orléans </wicri:noRegion></affiliation></author><author><name sortKey="S, Maury" sort="S, Maury" uniqKey="S M" first="Maury" last="S">Maury S</name><affiliation wicri:level="1"><nlm:affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans </wicri:regionArea><wicri:noRegion>Orléans </wicri:noRegion><wicri:noRegion>Orléans </wicri:noRegion></affiliation></author></analytic><series><title level="j">Plant signaling & behavior</title><idno type="eISSN">1559-2324</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>DNA Methylation (genetics)</term><term>Environment (MeSH)</term><term>Genotype (MeSH)</term><term>Meristem (genetics)</term><term>Meristem (growth & development)</term><term>Plant Leaves (genetics)</term><term>Populus (genetics)</term><term>Populus (growth & development)</term><term>Trees (genetics)</term><term>Trees (growth & development)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Arbres (croissance et développement)</term><term>Arbres (génétique)</term><term>Environnement (MeSH)</term><term>Feuilles de plante (génétique)</term><term>Génotype (MeSH)</term><term>Méristème (croissance et développement)</term><term>Méristème (génétique)</term><term>Méthylation de l'ADN (génétique)</term><term>Populus (croissance et développement)</term><term>Populus (génétique)</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Arbres</term><term>Méristème</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>DNA Methylation</term><term>Meristem</term><term>Plant Leaves</term><term>Populus</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Meristem</term><term>Populus</term><term>Trees</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arbres</term><term>Feuilles de plante</term><term>Méristème</term><term>Méthylation de l'ADN</term><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Environment</term><term>Genotype</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Environnement</term><term>Génotype</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">In the context of climate changes, clarifying the causes underlying tree phenotypic plasticity and adaptation is crucial. Studies suggest a role of epigenetic mechanisms in response to external stimuli, raising the question whether such processes can promote acclimation of trees exposed to adverse climate conditions. Recently, we revealed an environmental epigenetic footprint in the shoot apical meristem (SAM) which could partially be transmitted mitotically, for several months, up until the winter-dormant bud in field conditions. Here, we extended our previous analysis to the leaves of the same P. deltoides×P. nigra clones. We aimed at estimating the range of developmentally, genetically, and environmentally induced variations on DNA methylation. We showed that only the first leaves emerging from the SAM displayed variations of DNA methylation under changing water conditions. We also found that these variations are genotype- and pedoclimatic site-dependent. Altogether, our data raised questions and perspectives on the direct acquisition, the maintenance of environmentally induced DNA methylation changes, and their mitotic transmission from the SAM to the first emerging leaves.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30915897</PMID><DateCompleted><Year>2020</Year><Month>04</Month><Day>27</Day></DateCompleted><DateRevised><Year>2020</Year><Month>04</Month><Day>27</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1559-2324</ISSN><JournalIssue CitedMedium="Internet"><Volume>14</Volume><Issue>6</Issue><PubDate><Year>2019</Year></PubDate></JournalIssue><Title>Plant signaling & behavior</Title><ISOAbbreviation>Plant Signal Behav</ISOAbbreviation></Journal><ArticleTitle>Developmental, genetic and environmental variations of global DNA methylation in the first leaves emerging from the shoot apical meristem in poplar trees.</ArticleTitle><Pagination><MedlinePgn>1596717</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1080/15592324.2019.1596717</ELocationID><Abstract><AbstractText>In the context of climate changes, clarifying the causes underlying tree phenotypic plasticity and adaptation is crucial. Studies suggest a role of epigenetic mechanisms in response to external stimuli, raising the question whether such processes can promote acclimation of trees exposed to adverse climate conditions. Recently, we revealed an environmental epigenetic footprint in the shoot apical meristem (SAM) which could partially be transmitted mitotically, for several months, up until the winter-dormant bud in field conditions. Here, we extended our previous analysis to the leaves of the same P. deltoides×P. nigra clones. We aimed at estimating the range of developmentally, genetically, and environmentally induced variations on DNA methylation. We showed that only the first leaves emerging from the SAM displayed variations of DNA methylation under changing water conditions. We also found that these variations are genotype- and pedoclimatic site-dependent. Altogether, our data raised questions and perspectives on the direct acquisition, the maintenance of environmentally induced DNA methylation changes, and their mitotic transmission from the SAM to the first emerging leaves.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>A-L</LastName><ForeName>Le Gac</ForeName><Initials>LG</Initials><Identifier Source="ORCID">0000-0002-3445-3863</Identifier><AffiliationInfo><Affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>b Institute for Biology III , University of Freiburg , Freiburg , Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>C</LastName><ForeName>Lafon-Placette</ForeName><Initials>LP</Initials><Identifier Source="ORCID">0000-0001-6634-8104</Identifier><AffiliationInfo><Affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>c Department of Botany , Charles University , Prague , Czech Republic.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>A</LastName><ForeName>Delaunay</ForeName><Initials>D</Initials><Identifier Source="ORCID">0000-0002-2519-5380</Identifier><AffiliationInfo><Affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>S</LastName><ForeName>Maury</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0003-0481-0847</Identifier><AffiliationInfo><Affiliation>a Laboratoire de Biologie des Ligneux et des Grandes Cultures (LBLGC), EA1207 USC 1328 INRA , Université d'Orléans , Orléans , France.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>03</Month><Day>27</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Plant Signal Behav</MedlineTA><NlmUniqueID>101291431</NlmUniqueID><ISSNLinking>1559-2316</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D019175" MajorTopicYN="N">DNA Methylation</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004777" MajorTopicYN="Y">Environment</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018519" MajorTopicYN="N">Meristem</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">DNA methylation</Keyword><Keyword MajorTopicYN="Y">drought</Keyword><Keyword MajorTopicYN="Y">epigenetic</Keyword><Keyword MajorTopicYN="Y">leaves</Keyword><Keyword MajorTopicYN="Y">poplar tree</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>3</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>4</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>3</Month><Day>28</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30915897</ArticleId><ArticleId IdType="doi">10.1080/15592324.2019.1596717</ArticleId><ArticleId IdType="pmc">PMC6546136</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Trends Plant Sci. 2010 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last="S">Maury S</name></country><country name="Allemagne"><noRegion><name sortKey="A L, Le Gac" sort="A L, Le Gac" uniqKey="A L L" first="Le Gac" last="A-L">Le Gac A-L</name></noRegion></country><country name="République tchèque"><noRegion><name sortKey="C, Lafon Placette" sort="C, Lafon Placette" uniqKey="C L" first="Lafon-Placette" last="C">Lafon-Placette C</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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